Explore public gene-expression and survival data from TCGA, GEO, GTEx, Xena, and CCLE. Every statistic and figure is computed on your device.
Cohort exploration, publication-style figures, and rigorous statistics — no cluster, no notebook, no upload of your questions required.
Plot supported cohorts as box, bar, or strip on every platform; Android also offers violin plots. Split by clinical stage, subtype, sample type, or mutation status, with effect sizes and Mann–Whitney or Kruskal–Wallis statistics as applicable. For CCLE, stratify 933 Treehouse cell lines by TCGA Acronym, tissue, disease, histology, or subtype.
Stratify survival by clinical variable, expression, or mutation. Eligible High-versus-Low views present log-rank inference, median survival, and a Cox hazard ratio with 95% confidence interval plus its proportional-hazards diagnostic or non-estimable explanation.
Expression or mutant-vs-wild-type contrasts with panel-wise Benjamini–Hochberg correction.
Hierarchical clustering, multi-track annotations, Z-normalization, and an outlier-resistant diverging scale.
Score a custom signature or choose among 41 documented presets. The Wagle ten-gene MPAS panel defaults to a sample-centric full-transcriptome percentile-rank mean; its paper-associated within-cohort standardized Z-sum remains selectable.
Case counts, sites, disease types, and demographics — with a Summary tab for at-a-glance context.
Search NCBI GEO with cancer-term expansion. Bundled availability badges are historical predictions, not verified results; GeneFox verifies a Series when you open it. Supported paths include Series Matrix files, human NCBI-generated RNA-seq counts, bounded complete-cohort ARCHS4 raw counts only for GEO-classified human or mouse expression RNA-seq Series, and author-supplied supplementary matrices.
Capture figures into multi-figure reports with an auto-generated methods section. Export PDF or HTML on Apple devices and HTML on Android.
Type a question the way you'd say it. GeneFox interprets it on your device where supported and answers with real, interactive result cards — not a wall of text.
On supported production iPhone, iPad, native macOS, iPad-on-Mac, and Android execution, optional Cloud Assist sends your typed question plus interpretation instructions, capability flags/tokens, and response-schema metadata to Google after a one-time authorization or previously granted standing consent. It does not automatically attach data files, dataset titles or IDs, expression values, bookmarks, or history. Unsupported or misconfigured destinations fail closed to local interpretation. Cloud Assist is for adults using it for professional or business scientific research.
GeneFox has no ads, behavioral analytics, third-party tracking, or account requirement. Core analyses run locally; public-data requests and optional services are disclosed before use.
GeneFox does not include Firebase Analytics, behavioral telemetry, third-party trackers, or advertising identifiers. The Privacy Policy details each platform’s data flows.
Box plots, survival curves, volcano plots, and heatmaps are calculated locally. Scientific requests go directly to the public data providers you choose.
Bookmarks and pinned cohorts stay private to you and export/import as portable files — carry your work between devices, no cloud lock-in.
A serious genomics bench for researchers — free of ads, accounts, and tracking. Available for iPhone, iPad, Mac, and Android.